PubChem is a public chemical information resource, developed and maintained by the U.S. National Institutes of Health. Thomas Jefferson National Accelerator Facility - Office of Science Education It's Elemental - The Periodic Table of Elements. I really appreciate your sharing this valuble resource.

. 9. If you compare the year of discovery between the two sources, you will see that some elements indeed have discrepancies (+/- 1 year for some, but often more than +/-30 years for others). A paper about the PubChem Periodic Table and Element pages (https://doi.org/10.1515/cti-2020-0006) has been published in Chemistry Teacher International. Slater, J. C., ATOMIC RADII IN CRYSTALS. PubChem Periodic Table (Figures 2-4) can be accessed by clicking the Periodic Table icon on the PubChem homepage (https://pubchem.ncbi.nlm.nih.gov) (Figure 1). If you go to the Pubchem periodic table and click "standard state, you will see 2 elements are liquid, 11 are gasses, and one (Og) is "expected" to be a gas. With that said, PubChem does not fix the incorrect/misleading data that it does not own. I note that when the width gets small you lose the "display property/trend" option, even if it is in the url (the above one is activating Electron Affinity"), and am thinking it might be of value to have a widget that could placed in a webpage and show a default property, even it it was only the element symbol and the property. Pure Appl. This section has some paragraphs from three different sources (IUPAC, Jefferson Lab, and Los Alamos Lab). The D lines of sodium are among the most prominent in the solar spectrum. In 1844 Klaus, generally recognized as the discoverer, showed that Osann's ruthenium oxide was very impure and that it contained a new metal. Without it, chemistry would be a chaotic, confusing jumble of seemingly random observations. About half of them are between ages 18 and 24, suggesting that PubChem is heavily used by undergraduate or graduate students at academic institutions. 2016, 88, 293-306. 1990, 67, 307-308. The PubChem Periodic Table can be accessed by clicking the Periodic Table icon (indicated with the green box). Europium is used in the form of its salts as coatings for cathode ray tubes and in the form of its organic derivatives as shift reagents in NMR spectroscopy. Kim, S.; Thiessen, P. A.; Bolton, E. E.; Chen, J.; Fu, G.; Gindulyte, A.; Han, L. Y.; He, J. E.; He, S. Q.; Shoemaker, B. JZ compiled and integrated element information. While Berzelius found no unusual metals, Osann thought he found three new metals, one of which he named ruthenium. Periodic Table Image CC0 and from Wikimedia.org. Figure 1. Phys. PT created the PUG REST interface. PubChem: Periodic Table of Elements. We are thankful for the overall efforts of the entire PubChem team and other teams throughout NCBI, without of which this work would not be possible. The data presented in the Periodic Table and Element pages can be downloaded by clicking the “Download” button available at the top-right corner of the List View of the Periodic Table and the respective element pages. 6. The PubChem member who collected the year of discovery data told me that he picked most agreed value among the three sources in the history section for each element, and if there is no clear agreement, he picked the year provided by the Jefferson lab. It is also possible to download the annotations presented on the Element page using the following PUG-View request (with hydrogen as an example): https://pubchem.ncbi.nlm.nih.gov/rest/pug_view/data/element/1/JSON. 8. This kind of year gaps commonly occurs for elements discovered before 20th century. The PubChem Periodic Table is a public service and, if you want, you can embed it within your web page for free, using the iframes (as you mentioned). Classified as an actinide, Lawrencium is a solid at room temperature. All authors read and approved the final manuscript. . Am. Chem. 17. In my opinion, Bob and Robert are both right. The scientific community has declared 2019 to be “ The International Year of the Periodic Table ”. Mann, J. Now it's determined dynamically based on the width of the web browser. 1964, 41, 3199-3204. Am. EB contributed to the design. (For example, you could have a series of questions dealing with bond polarity, and have the electronegativity widgit provide that data, instead of listing it in a table). Meija, J.; Coplen, T. B.; Berglund, M.; Brand, W. A.; De Bievre, P.; Groning, M.; Holden, N. E.; Irrgeher, J.; Loss, R. D.; Walczyk, T.; Prohaska, T., Isotopic compositions of the elements 2013 (IUPAC Technical Report). Click on an element to see some of its physical properties. The data presented on the Periodic Table and Element pages are integrated from scientific articles and authoritative data sources. Figure \(\PageIndex{1}\): A Modern Periodic Table. Figure 4. The periodic table in its present form is considered to be first introduced in 1869 by a Russian chemist, Dimitry Mendeleev, although there had been earlier attempts to classify elements by their similarities. So, when you use PubChem, you often see discrepancies between the data from different sources. Mann, J. If you click the silicon on the Periodic Table, you will be directed to the element page for silicon, and from there you will be able to find the atomic mass values from four different sources (https://pubchem.ncbi.nlm.nih.gov/element/14#section=Atomic-Weight). But, if you check the history section of the element, you will get a better idea why a particular year was picked as the year of discovery. The element page can also be reached directly via URLs that includes atomic number, symbol, or name (all case-insensitive). Soc. Because the traditional, Table View (https://pubchem.ncbi.nlm.nih.gov/ptable/#view=table) is somewhat wide to fit within the browser window (for example, when you are accessing the page from a mobile device), so the default view for a narrow window is set to the List View (https://pubchem.ncbi.nlm.nih.gov/ptable/#view=list). We’re celebrating by launching the PubChem Periodic Table and Element pages, where you can find chemical element data and data sources. Sodium is the fourth most abundant element on earth, comprising about 2.6% of the earth's crust; it is the most abundant of the alkali group of metals. PubChem is the world's largest collection of freely accessible chemical information. The name derives from the Latin arsenicium and the Greek arsenikos for "masculine" or … The atomic mass of tin (Sn) is 118.71 u while the atomic mass of carbon (C) is 12.011 u. The tabular organization (left to right and top to bottom) is very important, reflecting key trends and commonalities. We are grateful to Dr. Jason Telford, who organized Spring 2019 ConfChem Newsletter. PubChem provides for a given chemical a Compound Summary page, a comprehensive overview of all information available within PubChem for that chemical. The PubChem Periodic Table and Element pages help you navigate the abundant chemical element data available within PubChem, while providing a convenient entry point to explore additional information, such as bioactivities, health and safety data, available in PubChem Compound pages for specific elements and their isotopes. The game has three levels of difficulty (easy, medium, and hard). Chem. Chem. Download. Switching between the views can be done with the tabs available at the top-left cornor of the periodic table. Search the PubChem Compound database with your drawn structure AG generated the user interface. While the Compound Summary page is appropriate to present data for most chemicals, it is not designed for displaying information specific to elements (such as electronegativity and electron configuration). An interactive Periodic table can be found here. Journal of Inorganic & Nuclear Chemistry 1961, 17, 215-221. •          The List View (https://pubchem.ncbi.nlm.nih.gov/ptable/#view=list) allows one to see a set of properties available for each element all at once. Examples are shown below. Electron Configuration [Rn]7s 2 5f 14 6d 1. 14. A modern periodic table lists elements left to right by atomic number. An element of the rare earth family of metals. I would like to mention how element data from different sources are dealt with within PubChem. Snapshot of the Element page for carbon, accessible via the URL: https://pubchem.ncbi.nlm.nih.gov/element/Carbon. B.; Meek, T. L.; Knight, E. T.; Capitani, J. F.; Allen, L. C., Configuration energies of the d-block elements. First, that even the molar mass (average isotopic composition) can vary from sample to sample for some elements. 1989, 111, 9003-9014. The PubChem Periodic Table can be accessed by clicking the Periodic Table icon (indicated with the green box). https://pubchem.ncbi.nlm.nih.gov/ptable/#view=table&property=YearDiscovered (PubChem P-Table)https://en.wikipedia.org/wiki/Timeline_of_chemical_element_discoveries (Wikipedia). The PubChem Periodic Table and Element pages help you navigate the abundant chemical element data available within PubChem, while providing a convenient entry point to explore additional information, such as bioactivities, health and safety data, available in PubChem Compound pages for specific elements and their isotopes. Allred, A. L., ELECTRONEGATIVITY VALUES FROM THERMOCHEMICAL DATA. https://periodic.lanl.gov/index.shtml (accessed 5/2/2019). http://ciaaw.org/ (accessed 5/2/2019). Cite As Vincent Scalfani (2020). At the top of each Element page is a periodic table, which allows one to quickly move to other elements’ pages. A.; Wang, J. Y.; Yu, B.; Zhang, J.; Bryant, S. H., PubChem Substance and Compound databases. Snapshot of the Game View of PubChem Periodic Table (https://pubchem.ncbi.nlm.nih.gov/ptable/). Cite. These new services help users navigate the abundant chemical element data available within PubChem, while providing a convenient entry point to explore additional information, such as bioactivities and health and safety data, available in PubChem Compound pages for specific elements and their isotopes. Snapshot of the List View of PubChem Periodic Table (https://pubchem.ncbi.nlm.nih.gov/ptable/). Expert. Los Alamos National Laboratory Periodic Table of Elements. Opin. Using the search box at the top-left corner, one can quickly find an element of interest. Kim, S.; Chen, J.; Cheng, T.; Gindulyte, A.; He, J.; He, S.; Li, Q.; Shoemaker, B. Since the launch in 2004, PubChem has become a key chemical information resource for scientists, students, and the general public. With 3.5 million unique users per month at peak, it is considered as one of the top five chemistry web sites in the world in terms of web traffic. I think PubChem's periodic table is really amazing, and I can see how it could be of great value to a variety of classes, in a variety of ways. I was asked about the discrepancy in the year of discovery for some elements between the PubChem Periodic Table and Wikipedia data. Oxygen had been produced by several chemists prior to its discovery in 1774, but they failed to recognize it as a distinct element. m®'4x‚þúôÊ,-§èqu°‰Ä#.& Programmatic access to these data are supported through PUG-REST and PUG-View, which are Representational State Transfer (REST)-like interface to PubChem information. (Public Domain; PubChem via NIH) Features of the Periodic Table. The PubChem Periodic Table and Element pages help you navigate the abundant chemical element data available within PubChem, while providing a convenient entry point to explore additional information, such as bioactivities, health and safety data, available in PubChem Compound pages … Of course, considering that the interpretation of these data is quite subjective, the year data can be changed in the future (based on the feedback we get from our users). There’s always more to learn, so check out the PubChem blog for more about this incredible old resource. Hydrogen is a commercially important element. Obviously, there is a great level of subjectivity when collecting/interpreting these year data. The elements can be colored according to various elemental properties (atomic mass, standard state, group block, electron configuration, etc.) 2016, 11, 843-855. The periodic table was invented by Russian chemist and inventor Dmitri Mendeleev in 1869. Learn about PubChem chemical database, browse or search the documentation and find PubChem staff contact information. The atomic mass of each element is found under the element symbol in the periodic table. View Periodic_Table_of_Elements_w_Oxidation_States_PubChem.pdf from BSME 39011 at Polytechnic University of the Philippines Open University. Carbon is a chemical element with symbol C and atomic number 6. To join the discussionemail the site administratorBob Belford rebelford@ualr.edu. One of the PubChem scientists have read these paragraphs to collect the year of discovery for each element. 3. 4. And second, that in this world of fingertip access to data, there is no excuse not to maintain the data provenance. About 40% of PubChem users are aged between 18 and 24, many of which are likely to be students enrolled in academic institutions. 13. Large amounts of hydrogen are combined with nitrogen from the air to produce ammonia (NH 3) through a process called the Haber process.Hydrogen is also added to fats and oils, such as peanut oil, through a process called hydrogenation. On the other hand, the atomic number (Z) of each element is found above the atomic symbol. NCBI and PubChem are celebrating the 150th anniversary of the periodic table of chemical elements, one of the most recognized tools in science. Soc. With that said, I support the idea that you should cite the actual source of the data you are talking about. Anyways, this periodic table is a great resource that I am sure many educators and students will use, and we thank PubChem for making it available. Alternatively, it can also be directly accessed via the following URL: https://pubchem.ncbi.nlm.nih.gov/ptable/. Sodium nitrate (NaNO 3) and potassium nitrate (KNO 3) are formed by the decomposition of organic matter with compounds of these metals present.In certain dry areas of the world these saltpeters are found in quantity and are used as fertilizers. This paper describes the PubChem Periodic Table and Element pages, which were recently introduced to celebrate the 150th anniversary of the periodic table. One caveat of using the iframes is that you should deal with the width of the iframe, which may affect the dynamic layout of the periodic table. DivCHED CCCE: Committee on Computers in Chemical Education, ConfChem and Newsletter Discussion Protocols, https://pubchem.ncbi.nlm.nih.gov/ptable/#view=table, https://pubchem.ncbi.nlm.nih.gov/ptable/#view=list, https://pubchem.ncbi.nlm.nih.gov/ptable/#view=game, https://pubchem.ncbi.nlm.nih.gov/ptable/#view=table&property=ElectronAffinity, https://pubchem.ncbi.nlm.nih.gov/element/14#section=Atomic-Weight, Discrepancy in the year discovered btw PubChem & Wikipedia, https://pubchem.ncbi.nlm.nih.gov/ptable/#view=table&property=YearDiscovered, https://en.wikipedia.org/wiki/Timeline_of_chemical_element_discoveries. 5. If you click on Og and go to it's PubChem elemental page you see the most stable isotope has a half life of 0.89 millliseconds, and only a few atoms have ever been produced. If you click on Og and go to it's PubChem elemental page you see the most stable isotope has a half life of 0.89 millliseconds, and only a few atoms have ever been produced. B.; Meek, T. L.; Allen, L. C., Configuration energies of the main group elements. PubChem is a public chemical information resource, developed and maintained by the U.S. National Institutes of Health. Allen, L. C., ELECTRONEGATIVITY IS THE AVERAGE ONE-ELECTRON ENERGY OF THE VALENCE-SHELL ELECTRONS IN GROUND-STATE FREE ATOMS. We can see two different years (1827 vs 1844) are mentioned here, and PubChem picked 1828, while Wikipedia picked 1844. Because of this dynamic default, you will see the List View on the mobile device and the table view on a large moniter connected to a Mac/PC. If you go to the PubChem Periodic Table and look at the atomic mass of silicon, you will see it’s listed as 28.09. If they follow Bob's advice to check on the data given in Wikipedia or PubChem by going to that source, then they ought to cite that source—and they can ethically do so because they will have consulted it to verify it. Lr. However, it is not always easy to say when a particular element was discovered. Ïù°÷Œ˜£ËU¼Þ­~I…DÂ$Þ]A³Ëۏ:ø»Íø;eÒn¡êmcòýƒÊ›ºwýÞ_×i]!­ÉxsTý£zgË㛠ž)P?†8¯1SFH_wýX é÷'ªò._z‡`ƒò©¡•¸©h:I½ö©Òxkm°£û§¿7. In summary, when there are multiple values for a given property, PubChem does not pick one of them as a representative value. Look up chemical element names, symbols, atomic masses and other properties, visualize trends, or even test your elements knowledge by playing a periodic table game! 2000, 122, 2780-2783. In fact, I would argue that students should be taught not to use PubChem (or Wikipedia) as a data source citation, but use the source that provided the data to PubChem (or Wikipedia), and to even validate that source is correct (which I think is more important with Wikipedia than PubChem). Sodium is present in fair abundance in the sun and stars. The present paper provides an overview of the PubChem Periodic Table and Element pages. NCBI and PubChem are celebrating the 150th anniversary of the periodic table of chemical elements, one of the most recognized tools in science. We also thank the members of the Committees on Computers in Chemical Education (CCCE) for providing valuable feedback about PubChem resources. 2. with the selected property value displayed for each element, by using the drop-down menu available at the top-right corner. Find chemical and physical properties, biological activities, safety and toxicity information, patents, literature citations and more. And that is one of the advantages of PubChem over many other resources, in that you know where the data came from. as well as isotopes, history, uses, and, most importantly, information source. Substitute oxygen, nitrogen and sulfur atoms into the structure by clicking on the atoms in the top row of the modified periodic table and then sequentially clicking on the appropriate sites. For example, the following PUG-REST request URL allows one to retrieve key elemental data presented in the Periodic Table in CSV format: https://pubchem.ncbi.nlm.nih.gov/rest/pug/periodictable/CSV. Once the default view is loaded, this view will be shown even if the window size is adjusted. On the other hand, the other two sources provide the “conventional” atomic mass value that can be used to compute atomic weights for unspecified samples, with disregard to the uncertainty. Visual Elements Periodic Table. I think you have brought up two very important points that students often miss. Alternatively, PubChem may the data invisible to the user (i.e., removed from the PubChem page). Figure 5. 2000, 122, 5132-5137. The scientific community has declared 2019 to be “The International Year of the Periodic Table”. Snapshot of PubChem Homepage (https://pubchem.ncbi.nlm.nih.gov). To learn more about this, please read this post (https://go.usa.gov/xmUQ9). I would make the further point, which is a bit far afield of the original discussion, that one of the most valuable aspects of Wikipedia for scholarly work is to point scholars to more detailed and vetted sources. It has the atomic symbol Eu, atomic number 63, and atomic weight 152. For example, the history of Ruthenium can be accessed at: https://pubchem.ncbi.nlm.nih.gov/element/44#section=History. PubChem does not “own” data, but it collects/aggregates them from hundreds of data sources and give these data to those who need them (with some exceptions like some properties computed by PubChem, e.g., molecular weights, H-bond donor/acceptor count, …). https://pubchem.ncbi.nlm.nih.gov/element/9#section=History. The periodic table of chemical elements is one of the most recognized tools in science. Classified as a nonmetal, Carbon is a solid at room temperature. One can select one of the three views by clicking the “TABLE”, “LIST W/ PROPERTIES” and “GAME” tabs, available above the upper-right corner of the Periodic Table. 7. Nucleic Acids Research 2016, 44, D1202-D1213. Meija, J.; Coplen, T. B.; Berglund, M.; Brand, W. A.; De Bievre, P.; Groning, M.; Holden, N. E.; Irrgeher, J.; Loss, R. D.; Walczyk, T.; Prohaska, T., Atomic weights of the elements 2013 (IUPAC Technical Report). Lawrencium is a chemical element with symbol Lr and atomic number 103. For example, the following URLs are for the Element page for carbon: https://pubchem.ncbi.nlm.nih.gov/element/Carbon, https://pubchem.ncbi.nlm.nih.gov/element/C, https://pubchem.ncbi.nlm.nih.gov/element/6. Currently, we don’t have a plan to provide the periodic table as a widget, but we may consider it if many people request us to do so. https://www-nds.iaea.org/amdc/ (accessed 5/2/2019). The scientific community has declared 2019 to be “The International Year of the Periodic Table”. Click the Done button when finished. Now you see that two sources provided a range of values for the atomic mass of silicon ([28.084, 28.086]) and the other two sources provided single values with different precisions (28.0855 and 28.09). This year gap is often larger than 100 years (for example, for fluorine, fluorine compounds were reported as early as back in 1670, but fluorine was isolated in 1886 (216 years later), as explained in here. NCBI and PubChem are celebrating the 150th anniversary of the periodic table of chemical elements, one of the most recognized tools in science. https://www.nist.gov/pml (accessed 5/2/2019). National Institute of Standards and Technology Physical Measurement Laboratory. Actually, this is a very good practice, regardless of what website you are using (PubChem, Wikipedia, or anything else). Clicking an element in the Table or List Views of PubChem Periodic Table directs you to the corresponding Element page (Figure 5). https://education.jlab.org/itselemental/ (accessed 5/2/2019). •          The Table View (https://pubchem.ncbi.nlm.nih.gov/ptable/#view=table) is the traditional periodic table any scientist would instantly recognize. By default, the Table View is presented. These data can be downloaded in machine-readable formats through the web browser or programmatically, giving the user access to the data in his or her own program. SK wrote the initial draft and SK, AG, JZ, PT, and EB revised it. Periodic Table; element Summary; Lawrencium. For example, here is an excerpt from the history of Ruthenium: "From the Latin word Ruthenia, Russia. Am. Since this newsletter was posted, there has been some change in how the default view of the PubChem Periodic Table is determined. Just as students should be taught to cite their literature research, they should be taught to cite their data sources. The best way to view PubChem is that it “delivers” from data owners to data consumers. Commission on Isotopic Abundances and Atomic Weights. For a wider window, the Table view is the default. The data are available in various formats, including XML, JSON, ASNT, and CSV (for the Periodic Table data only). The PubChem Periodic Table can be accessed by clicking the Periodic Table icon (indicated with the green box). In that case, it is highly recommended to visit the original data sources to check the context (or metadata) of the data. Oxidation States +3. The periodic table is a table that contains all the know chemical elements. In this example, we download PubChem machine-readable periodic table JSON data and assemble a table of element names and InChIs. The Periodic Table is optimized for printing and/or saving as the Portable Document Format (PDF), hiding unnecessary user interface (UI) components (e.g., the icons and dropdown menu). The PubChem Periodic Table and Element pages (61) were introduced to help users navigate the abundant chemical elemental data within PubChem, while providing a convenient entry point to explore additional chemical content, such as biological activities and health and safety data available in PubChem Compound pages for specific elements and their isotopes. There is much students in the classrom can learn about chemistry from the periodic table and they should get familar with it. J. The “Download” button at the top-right corner allows one to download all data presented on the Periodic Table. 1National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD. Its simplicity and grace may make it easy to overlook the wealth of information contained therein. The data presented on the Element page can be downloaded using the “Download” button at the top-right corner. 2016, 88, 265-291. 94 of the 118 chemical elements on the periodic table occur naturally. View Periodic_Table_of_Elements_w_Chemical_Group_Block_PubChem.png from BIOL 2181 at Seton Hall University. Instead, it may contact the original data source to notify the issue and ask for fix, and if the original data source fix the issue, the fix will be reflected in the next update cycle. Kim, S., Getting the most out of PubChem for virtual screening. Alternatively, you can add a direct link to the periodic table (on your web page). Drug Discov. Soc. He said he did not take the Wikipedia values into account for this task. Elements that have similar chemical properties are grouped in columns called groups (or families). Klaus obtained 6 g of ruthenium from the portion of crude platinum that is insoluble in aqua regia.”  (Los Alamos National Lab). The Royal Society of Chemistry’s interactive periodic table which includes Murray Robertson’s Visual Elements artwork. Figure 2. This page presents a wide variety of element information, including atomic properties (electron affinity, electronegativity, ionization potential, oxidation states, electron configuration, etc.) The PubChem Periodic Table and Element pages help users navigate the abundant chemical element data available within PubChem, while providing a convenient entry point to explore additional information, such as bioactivities and health and safety data, available in PubChem Compound pages for specific elements and their isotopes. https://pubchemblog.ncbi.nlm.nih.gov/2016/11/29/atomic-mass-changes-in-pubchem/. Ptable – Introduction to the Periodic Table Ptable – Periodic table is the most powerful tool chemists have for organizing chemical information. This suggests PubChem’s great potential as a chemical education resource. Joseph Priestley and Carl Wilhelm Scheele both independently discovered oxygen, but Priestly is usually given credit for the discovery. If you use PubChem to find some data and stop there, you cite PubChem, but if you see some discrepancies in the data within PubChem, you will need to check individual data sources to what the data actually mean and cite the source of the data that you believe is most appropriate.

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Celebrating by introducing the PubChem Periodic Table can be accessed at: https: //pubchem.ncbi.nlm.nih.gov/ptable/ ) the of. C and atomic number, symbol, or name ( all case-insensitive ) left to right by number... Research, they should be taught to cite their literature research, they should get familar with it as. I was asked about the PubChem Periodic Table ( https: //pubchem.ncbi.nlm.nih.gov/element/44 # section=History for Biotechnology,. Or name ( all case-insensitive ) example, we download PubChem machine-readable Periodic Table (... Carl Wilhelm Scheele both independently discovered oxygen, but Priestly is usually given credit the... And InChIs Inorganic & Nuclear chemistry 1961, 17, 215-221 Sn ) is very important points that often...